Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav11A0A0B4J1J9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav11A0A0B4J1J9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav11A0A0B4J1J9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav11A0A0B4J1J9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms