Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm37055-201ENSMUST00000191866 133 ntBASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm27463-201ENSMUST00000183569 57 ntBASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms