Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-42A0A0A6YY38 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-42A0A0A6YY38 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-42A0A0A6YY38 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm10819-201ENSMUST00000099988 561 ntBASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-42A0A0A6YY38 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm9013-201ENSMUST00000132939 882 ntBASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm5587-201ENSMUST00000206270 674 ntBASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-42A0A0A6YY38 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-42A0A0A6YY38 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.02■□□□□ 0.15
Ighv1-42A0A0A6YY38 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Ighv1-42A0A0A6YY38 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm14859-201ENSMUST00000117752 357 ntBASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm11355-201ENSMUST00000121120 306 ntBASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ighv1-42A0A0A6YY38 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms