Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm10602-201ENSMUST00000098239 609 ntBASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav21-dv12A0A075B6C4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm11927-201ENSMUST00000118472 759 ntBASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav21-dv12A0A075B6C4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm2559-201ENSMUST00000201323 363 ntBASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm4968-201ENSMUST00000071458 858 ntBASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.36□□□□□ -0.27
Trav21-dv12A0A075B6C4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm10418-201ENSMUST00000100943 576 ntBASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Mtag2-201ENSMUST00000058665 714 ntBASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav21-dv12A0A075B6C4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms