Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-5A0A075B6B5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Gm10418-201ENSMUST00000100943 576 ntBASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-5A0A075B6B5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-5A0A075B6B5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-5A0A075B6B5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-5A0A075B6B5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-5A0A075B6B5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-5A0A075B6B5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-5A0A075B6B5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-5A0A075B6B5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Gm45102-201ENSMUST00000207427 857 ntBASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Gm29791-202ENSMUST00000207888 369 ntBASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-5A0A075B6B5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms