Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-6A0A075B6B2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-6A0A075B6B2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm7290-201ENSMUST00000104990 617 ntBASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm12918-201ENSMUST00000120234 636 ntBASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm15710-201ENSMUST00000121821 636 ntBASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm5075-201ENSMUST00000196916 622 ntBASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-6A0A075B6B2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm6420-201ENSMUST00000193885 723 ntBASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms