Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6d-7A0A075B6B0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-7A0A075B6B0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-7A0A075B6B0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-7A0A075B6B0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm37856-201ENSMUST00000191634 999 ntBASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-7A0A075B6B0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm12896-201ENSMUST00000118430 226 ntBASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm10812-201ENSMUST00000099864 546 ntBASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav6d-7A0A075B6B0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms