Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-7A0A075B6A6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm715-201ENSMUST00000117865 831 ntBASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-7A0A075B6A6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6n-7A0A075B6A6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-7A0A075B6A6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm12085-201ENSMUST00000119263 940 ntBASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-7A0A075B6A6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms