Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Gm29791-202ENSMUST00000207888 369 ntBASIC13.84□□□□□ -0.19
Trav17A0A075B655 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.84□□□□□ -0.19
Trav17A0A075B655 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav17A0A075B655 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav17A0A075B655 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav17A0A075B655 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav17A0A075B655 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav17A0A075B655 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.83□□□□□ -0.19
Trav17A0A075B655 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav17A0A075B655 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Gm42778-201ENSMUST00000199644 553 ntBASIC13.83□□□□□ -0.2
Trav17A0A075B655 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav17A0A075B655 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Haglr-201ENSMUST00000100000 2085 ntBASIC13.83□□□□□ -0.2
Trav17A0A075B655 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav17A0A075B655 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.82□□□□□ -0.2
Trav17A0A075B655 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.82□□□□□ -0.2
Trav17A0A075B655 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav17A0A075B655 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.81□□□□□ -0.2
Trav17A0A075B655 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trav17A0A075B655 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav17A0A075B655 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.8□□□□□ -0.2
Trav17A0A075B655 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms