Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-3A0A075B648 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Gm45444-201ENSMUST00000211394 898 ntBASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-3A0A075B648 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-3A0A075B648 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12-3A0A075B648 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Gm40881-201ENSMUST00000223397 166 ntBASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms