Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8n-2A0A075B633 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav8n-2A0A075B633 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8n-2A0A075B633 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Trav8n-2A0A075B633 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8n-2A0A075B633 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8n-2A0A075B633 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Gm27357-201ENSMUST00000183754 135 ntBASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Gm45328-201ENSMUST00000210942 917 ntBASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav8n-2A0A075B633 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Gm27742-201ENSMUST00000184667 60 ntBASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Gm37722-201ENSMUST00000193757 208 ntBASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Gm10566-201ENSMUST00000086739 996 ntBASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Actl10-202ENSMUST00000226583 1501 ntBASIC15.89■□□□□ 0.13
Trav8n-2A0A075B633 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8n-2A0A075B633 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Mir770-201ENSMUST00000103252 94 ntBASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms