Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6n-5A0A075B621 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6n-5A0A075B621 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6n-5A0A075B621 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6n-5A0A075B621 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.49□□□□□ -0.25
Trav6n-5A0A075B621 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-5A0A075B621 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-5A0A075B621 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Gm10418-201ENSMUST00000100943 576 ntBASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-5A0A075B621 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-5A0A075B621 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-5A0A075B621 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-5A0A075B621 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-5A0A075B621 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-5A0A075B621 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-5A0A075B621 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-5A0A075B621 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Gm45102-201ENSMUST00000207427 857 ntBASIC13.45□□□□□ -0.26
Trav6n-5A0A075B621 Gm29791-202ENSMUST00000207888 369 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms