Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Gm5417-201ENSMUST00000079706 384 ntBASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Gm15565-201ENSMUST00000118890 427 ntBASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Gm13836-201ENSMUST00000121159 501 ntBASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13d-1A0A075B606 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Fst-202ENSMUST00000223640 2612 ntBASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Gm37292-201ENSMUST00000192062 758 ntBASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-1A0A075B606 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-1A0A075B606 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms