Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm9068-201ENSMUST00000217393 455 ntBASIC6.53□□□□□ -1.36
Ube3bQ9ES34 AC123860.1-201ENSMUST00000228033 481 ntBASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.53□□□□□ -1.36
Ube3bQ9ES34 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm7709-201ENSMUST00000199391 1858 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm25919-201ENSMUST00000104271 132 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm14163-201ENSMUST00000117342 217 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm13311-201ENSMUST00000117863 379 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm14926-201ENSMUST00000120650 508 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm14601-201ENSMUST00000120892 236 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm14765-201ENSMUST00000121954 326 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm23829-201ENSMUST00000157392 270 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm23262-201ENSMUST00000158323 168 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Mir3066-201ENSMUST00000175296 83 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21842-201ENSMUST00000177552 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21626-201ENSMUST00000177791 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21562-201ENSMUST00000177888 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21539-201ENSMUST00000177925 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21599-201ENSMUST00000178249 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21914-201ENSMUST00000178452 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21723-201ENSMUST00000178692 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21916-201ENSMUST00000178771 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21801-201ENSMUST00000178865 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21633-201ENSMUST00000178941 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21821-201ENSMUST00000179646 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm22307-201ENSMUST00000180019 107 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21588-201ENSMUST00000180074 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21780-201ENSMUST00000180128 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21572-201ENSMUST00000180134 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm21529-201ENSMUST00000180175 498 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm19637-201ENSMUST00000185933 579 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm29370-202ENSMUST00000187476 499 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm9443-201ENSMUST00000188406 816 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm7652-201ENSMUST00000200440 1151 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 AC139750.2-201ENSMUST00000224424 386 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm23456-201ENSMUST00000083335 137 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ube3bQ9ES34 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.52□□□□□ -1.37
Ube3bQ9ES34 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm11975-201ENSMUST00000118772 481 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm13488-201ENSMUST00000120419 179 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm11369-201ENSMUST00000120812 318 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm14049-201ENSMUST00000121009 636 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm11804-201ENSMUST00000121663 468 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm22537-201ENSMUST00000158172 199 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Mir3110-201ENSMUST00000175053 80 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm29479-201ENSMUST00000190352 455 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm44431-201ENSMUST00000203500 413 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms