Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Mir147-201ENSMUST00000102354 79 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm13311-201ENSMUST00000117863 379 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm11409-201ENSMUST00000118621 403 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm12379-201ENSMUST00000119607 391 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm7071-201ENSMUST00000120458 462 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm14915-201ENSMUST00000120747 204 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm14903-201ENSMUST00000122435 537 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm23959-201ENSMUST00000157208 324 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm22084-201ENSMUST00000157585 105 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm25365-201ENSMUST00000158852 121 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm17919-201ENSMUST00000173344 312 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm22852-201ENSMUST00000177899 101 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm42776-201ENSMUST00000198031 406 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm44348-201ENSMUST00000200165 122 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm18482-201ENSMUST00000202405 760 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Upf1Q9EPU0 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm25088-201ENSMUST00000101803 79 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm24127-201ENSMUST00000104110 130 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm24608-201ENSMUST00000104381 136 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm11372-201ENSMUST00000117348 570 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm12458-201ENSMUST00000119387 495 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm15364-201ENSMUST00000119618 585 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm15177-201ENSMUST00000120491 577 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm25294-201ENSMUST00000122791 104 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Mir6408-201ENSMUST00000183643 91 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Mir7093-201ENSMUST00000184195 101 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm6802-202ENSMUST00000186566 126 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm9227-201ENSMUST00000194733 566 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm4248-201ENSMUST00000196905 316 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm5265-201ENSMUST00000076828 342 ntBASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf1Q9EPU0 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms