Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm25096-201ENSMUST00000104043 129 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Lipe-203ENSMUST00000105177 1251 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm11367-201ENSMUST00000117802 120 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm15177-201ENSMUST00000120491 577 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm12095-201ENSMUST00000121962 816 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm12755-201ENSMUST00000122297 282 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm23212-201ENSMUST00000122718 60 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm22819-201ENSMUST00000157445 303 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm17109-201ENSMUST00000163985 358 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm25037-201ENSMUST00000175418 110 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Npn2-202ENSMUST00000189275 235 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm38061-201ENSMUST00000192490 365 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm42465-201ENSMUST00000197036 492 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm42643-201ENSMUST00000200504 279 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm2522-201ENSMUST00000204280 322 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm45192-201ENSMUST00000206749 283 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm44779-201ENSMUST00000206937 708 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 CT010505.1-201ENSMUST00000227026 396 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx56Q9D0R4 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Ddx56Q9D0R4 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
Ddx56Q9D0R4 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Ddx56Q9D0R4 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.96□□□□□ -1.61
Ddx56Q9D0R4 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm15297-201ENSMUST00000117795 290 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm15060-201ENSMUST00000119550 948 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm13213-201ENSMUST00000119668 474 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm12294-201ENSMUST00000119723 490 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm11357-201ENSMUST00000119758 954 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm23118-201ENSMUST00000122657 187 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm26098-201ENSMUST00000157247 288 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm22555-201ENSMUST00000157801 62 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm25194-201ENSMUST00000177987 79 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm26960-201ENSMUST00000182263 412 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm37337-201ENSMUST00000192601 993 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm28724-202ENSMUST00000194218 295 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Mir6994-201ENSMUST00000198985 73 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms