Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Mir7669-201ENSMUST00000183442 58 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm8282-201ENSMUST00000187559 483 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm6230-201ENSMUST00000208077 780 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm22472-201ENSMUST00000104115 134 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm15936-201ENSMUST00000118706 460 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm15212-201ENSMUST00000122403 466 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm21893-201ENSMUST00000179119 397 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm37353-201ENSMUST00000194497 313 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Gm26494-201ENSMUST00000083154 143 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Gm24493-201ENSMUST00000083805 143 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Mir7026-201ENSMUST00000184384 67 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Gm29484-201ENSMUST00000186067 324 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Gm4322-201ENSMUST00000191094 336 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Gm37456-201ENSMUST00000193176 5837 ntBASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdh23Q99PF4 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm22500-201ENSMUST00000158982 99 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm45635-201ENSMUST00000211516 2134 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm13607-201ENSMUST00000117875 539 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm15377-201ENSMUST00000119594 246 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm15022-201ENSMUST00000122074 746 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm14402-201ENSMUST00000122217 508 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm24443-201ENSMUST00000157242 132 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm19203-201ENSMUST00000174049 939 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm18433-202ENSMUST00000195682 196 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Mir410-201ENSMUST00000083563 81 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm4017-201ENSMUST00000084813 338 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Cdh23Q99PF4 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.12□□□□□ -1.91
Cdh23Q99PF4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm12568-201ENSMUST00000117362 624 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm13379-201ENSMUST00000118053 621 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm10075-201ENSMUST00000162030 545 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm5527-201ENSMUST00000179821 642 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm36985-201ENSMUST00000195595 379 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm8319-201ENSMUST00000205708 641 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm7368-201ENSMUST00000213307 367 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms