Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.47□□□□□ -1.85
Lsm1Q8VC85 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Gm4052-201ENSMUST00000220890 451 ntBASIC3.47□□□□□ -1.85
Lsm1Q8VC85 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.47□□□□□ -1.85
Lsm1Q8VC85 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.47□□□□□ -1.85
Lsm1Q8VC85 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.47□□□□□ -1.85
Lsm1Q8VC85 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lsm1Q8VC85 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Lsm1Q8VC85 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Lsm1Q8VC85 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Mir291a-201ENSMUST00000104815 82 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm11372-201ENSMUST00000117348 570 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm11393-201ENSMUST00000118019 288 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm23228-201ENSMUST00000157296 270 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm26746-201ENSMUST00000181722 487 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Mir6986-201ENSMUST00000184483 58 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm19418-201ENSMUST00000197436 580 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm43441-201ENSMUST00000201458 205 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm4501-201ENSMUST00000207330 551 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm4528-201ENSMUST00000207905 551 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm44852-201ENSMUST00000207950 369 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm6929-201ENSMUST00000210930 468 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm25005-201ENSMUST00000083812 156 ntBASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.46□□□□□ -1.86
Lsm1Q8VC85 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm23271-201ENSMUST00000104052 124 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm14163-201ENSMUST00000117342 217 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm25432-201ENSMUST00000158284 66 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm25605-201ENSMUST00000158364 124 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Mir6963-201ENSMUST00000183535 71 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm37698-201ENSMUST00000192605 463 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm19620-201ENSMUST00000195972 434 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm43124-201ENSMUST00000201878 278 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm18644-201ENSMUST00000211458 815 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm34005-201ENSMUST00000215834 282 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm18016-201ENSMUST00000216119 801 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.45□□□□□ -1.86
Lsm1Q8VC85 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm5757-201ENSMUST00000117494 528 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm12788-201ENSMUST00000119090 308 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm14253-201ENSMUST00000122112 639 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm22816-201ENSMUST00000157450 117 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm22726-201ENSMUST00000158089 179 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm27903-201ENSMUST00000175482 126 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm27189-201ENSMUST00000184119 190 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm37791-201ENSMUST00000195081 286 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm37575-201ENSMUST00000195467 309 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm17951-201ENSMUST00000198536 496 ntBASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.44□□□□□ -1.86
Lsm1Q8VC85 Gm7726-201ENSMUST00000206241 231 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms