Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm25475-201ENSMUST00000082825 180 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm25140-201ENSMUST00000083254 140 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Mir193b-201ENSMUST00000103784 79 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm6429-201ENSMUST00000117144 475 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm11874-201ENSMUST00000117437 130 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm14621-201ENSMUST00000117709 689 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm14706-201ENSMUST00000117744 255 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm13459-201ENSMUST00000121558 646 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm22555-201ENSMUST00000157801 62 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm23387-201ENSMUST00000158586 107 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Mir5098-201ENSMUST00000175320 82 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Mir6398-201ENSMUST00000184541 102 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm43829-201ENSMUST00000196191 3802 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm42976-201ENSMUST00000200313 222 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm44765-201ENSMUST00000206927 601 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm20948-201ENSMUST00000211091 449 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm7240-201ENSMUST00000220769 664 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.06□□□□□ -1.6
Ccdc9Q8VC31 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm8145-201ENSMUST00000118220 745 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm6797-201ENSMUST00000119440 512 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm13720-201ENSMUST00000120741 196 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm12854-201ENSMUST00000128518 297 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Snora81-201ENSMUST00000157310 178 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm23327-201ENSMUST00000157420 78 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm26153-201ENSMUST00000157433 127 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm26393-201ENSMUST00000157625 129 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm2617-201ENSMUST00000185690 1066 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm29413-201ENSMUST00000186019 880 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm19503-201ENSMUST00000187109 241 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm28597-201ENSMUST00000187664 666 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm29639-201ENSMUST00000188375 580 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm28337-201ENSMUST00000190425 666 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm43954-201ENSMUST00000204634 544 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm20074-201ENSMUST00000208144 484 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm45523-201ENSMUST00000210712 799 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 AC115047.1-201ENSMUST00000213795 322 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm7530-201ENSMUST00000218466 605 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Gm7665-201ENSMUST00000076710 297 ntBASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc9Q8VC31 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms