Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm45409-201ENSMUST00000211486 252 ntBASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Gm10042-201ENSMUST00000079884 78 ntBASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Gm25131-201ENSMUST00000082653 151 ntBASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Gm25481-201ENSMUST00000083221 158 ntBASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rpp40Q8R1F9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm6913-201ENSMUST00000100019 348 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm14605-201ENSMUST00000120599 268 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm11645-201ENSMUST00000121589 649 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm14162-201ENSMUST00000121985 601 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm15212-201ENSMUST00000122403 466 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm23111-201ENSMUST00000122652 105 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm2092-201ENSMUST00000178887 639 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm2759-201ENSMUST00000179938 639 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm43104-201ENSMUST00000197234 311 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm43424-201ENSMUST00000200484 253 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 AC115047.1-201ENSMUST00000213795 322 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm22423-201ENSMUST00000082861 184 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm25200-201ENSMUST00000083094 130 ntBASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Rpp40Q8R1F9 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm14861-201ENSMUST00000119451 455 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm14926-201ENSMUST00000120650 508 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm11403-201ENSMUST00000122195 369 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm25037-201ENSMUST00000175418 110 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Mir6393-201ENSMUST00000183709 94 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm28384-201ENSMUST00000189079 463 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm19774-201ENSMUST00000190667 114 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm37000-201ENSMUST00000193058 428 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm37416-201ENSMUST00000193596 318 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Mir129b-201ENSMUST00000197461 65 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm43276-201ENSMUST00000199712 364 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm8745-201ENSMUST00000207846 782 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 AC164116.2-201ENSMUST00000225398 1038 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm7099-201ENSMUST00000080066 554 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm22829-201ENSMUST00000083771 106 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.29□□□□□ -1.72
Rpp40Q8R1F9 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms