Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm27033-201ENSMUST00000183226 544 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm27522-201ENSMUST00000183949 230 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm6140-201ENSMUST00000192494 966 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm38008-201ENSMUST00000195333 518 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm44404-201ENSMUST00000203979 636 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm43897-201ENSMUST00000204019 309 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm17911-201ENSMUST00000210806 877 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm22829-201ENSMUST00000083771 106 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm14879-201ENSMUST00000117308 507 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm13268-201ENSMUST00000117485 433 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm14989-201ENSMUST00000120497 207 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm15799-201ENSMUST00000120899 289 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm25109-201ENSMUST00000122474 114 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm24505-201ENSMUST00000157682 126 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm23112-201ENSMUST00000158606 125 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm23198-201ENSMUST00000158811 91 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm25748-201ENSMUST00000175487 70 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm29610-201ENSMUST00000187749 453 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm44395-201ENSMUST00000197056 153 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Mir703-201ENSMUST00000197105 109 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm43814-201ENSMUST00000197851 413 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm18429-201ENSMUST00000198707 421 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm45553-201ENSMUST00000209929 507 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm34779-201ENSMUST00000210036 263 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm17989-201ENSMUST00000211543 412 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 AC174797.4-201ENSMUST00000225510 347 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 AC163664.1-201ENSMUST00000226251 1248 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm23104-201ENSMUST00000083722 104 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup88Q8CEC0 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm13831-201ENSMUST00000118764 302 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm5943-201ENSMUST00000119458 459 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm12335-201ENSMUST00000119738 327 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Mup-ps4-201ENSMUST00000151005 539 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm23781-201ENSMUST00000157940 308 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm2389-201ENSMUST00000160487 189 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms