Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Mir6393-201ENSMUST00000183709 94 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm28155-201ENSMUST00000191066 151 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm37828-201ENSMUST00000192496 432 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm43765-201ENSMUST00000196303 893 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm45034-201ENSMUST00000206831 482 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm45312-201ENSMUST00000210566 311 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm19885-201ENSMUST00000212853 343 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm18016-201ENSMUST00000216119 801 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm3829-201ENSMUST00000222362 619 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Clrn3Q8BHH8 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Clrn3Q8BHH8 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Clrn3Q8BHH8 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.46□□□□□ -1.85
Clrn3Q8BHH8 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm23256-201ENSMUST00000102235 110 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm24715-201ENSMUST00000102377 95 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm26140-201ENSMUST00000103807 110 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm15854-201ENSMUST00000118879 808 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm11625-201ENSMUST00000119535 296 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm12873-201ENSMUST00000119988 422 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm12900-201ENSMUST00000120919 573 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm13471-201ENSMUST00000122057 433 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm26476-201ENSMUST00000122618 313 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm22789-201ENSMUST00000157884 130 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm17075-201ENSMUST00000171924 670 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm22908-201ENSMUST00000177620 110 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm28141-201ENSMUST00000186676 342 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm17967-201ENSMUST00000195319 647 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm6842-201ENSMUST00000211361 390 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm7530-201ENSMUST00000218466 605 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Clrn3Q8BHH8 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm25765-201ENSMUST00000104100 132 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm5942-201ENSMUST00000120046 439 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm11830-201ENSMUST00000120175 561 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm15733-201ENSMUST00000132957 242 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm23540-201ENSMUST00000157543 164 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm22890-201ENSMUST00000158642 144 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm19898-201ENSMUST00000177490 251 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm37193-201ENSMUST00000193087 513 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm37575-201ENSMUST00000195467 309 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm18429-201ENSMUST00000198707 421 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.45□□□□□ -1.86
Clrn3Q8BHH8 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms