Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm22266-201ENSMUST00000104011 138 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm13803-201ENSMUST00000117547 489 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm11737-201ENSMUST00000118713 468 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm15959-201ENSMUST00000121724 368 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Mir3095-201ENSMUST00000175552 87 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Mir7082-201ENSMUST00000183526 92 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Mir6921-201ENSMUST00000183719 80 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm27210-201ENSMUST00000184263 402 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Mir6418-201ENSMUST00000185075 115 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm28594-201ENSMUST00000187022 661 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm29376-201ENSMUST00000189357 835 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm28996-201ENSMUST00000190316 721 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm43456-201ENSMUST00000202519 457 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm44720-201ENSMUST00000206076 260 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm22229-201ENSMUST00000082987 108 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Rnf220Q6PDX6 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Rnf220Q6PDX6 Gm23593-201ENSMUST00000104309 120 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm13681-201ENSMUST00000117925 210 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm12039-201ENSMUST00000118219 180 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm12237-201ENSMUST00000120158 470 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm22563-201ENSMUST00000157333 269 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm23662-201ENSMUST00000158046 111 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm25606-201ENSMUST00000158363 95 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm25653-201ENSMUST00000158473 138 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm17183-201ENSMUST00000171170 493 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm38015-201ENSMUST00000193048 188 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm19649-201ENSMUST00000201126 822 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm43501-201ENSMUST00000202513 107 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm44162-201ENSMUST00000203543 544 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm33626-201ENSMUST00000206790 828 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm39197-201ENSMUST00000212069 457 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm18016-201ENSMUST00000216119 801 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm46194-201ENSMUST00000218136 320 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Gm22508-201ENSMUST00000082772 110 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Mir20a-201ENSMUST00000083508 107 ntBASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Rnf220Q6PDX6 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms