Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm15493-201ENSMUST00000119461 528 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm11388-201ENSMUST00000120908 159 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13007-201ENSMUST00000121866 365 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm11403-201ENSMUST00000122195 369 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm22960-201ENSMUST00000122517 104 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm23206-201ENSMUST00000122720 184 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm22597-201ENSMUST00000157602 80 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm23799-201ENSMUST00000175559 120 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm23191-201ENSMUST00000179147 107 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm29038-201ENSMUST00000191543 678 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43444-201ENSMUST00000198123 291 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43415-201ENSMUST00000201934 750 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25699-201ENSMUST00000082896 167 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Rny1-201ENSMUST00000083767 112 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14933-201ENSMUST00000118840 481 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14871-201ENSMUST00000119056 194 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14601-201ENSMUST00000120892 236 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm11829-201ENSMUST00000121003 282 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm26350-201ENSMUST00000157531 288 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm6486-201ENSMUST00000166202 434 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Mir6238-201ENSMUST00000184140 129 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm44002-201ENSMUST00000205134 594 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm45439-201ENSMUST00000211723 359 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sh3rf1Q69ZI1 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Mir208b-201ENSMUST00000104735 77 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14512-201ENSMUST00000117924 230 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13488-201ENSMUST00000120419 179 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms