Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.72□□□□□ -1.81
Six1Q62231 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.72□□□□□ -1.81
Six1Q62231 Gm37575-201ENSMUST00000195467 309 ntBASIC3.72□□□□□ -1.81
Six1Q62231 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.72□□□□□ -1.81
Six1Q62231 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.72□□□□□ -1.81
Six1Q62231 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Six1Q62231 Gm7639-201ENSMUST00000212608 484 ntBASIC3.72□□□□□ -1.81
Six1Q62231 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC3.72□□□□□ -1.81
Six1Q62231 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.72□□□□□ -1.81
Six1Q62231 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Six1Q62231 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.72□□□□□ -1.81
Six1Q62231 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.72□□□□□ -1.81
Six1Q62231 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.72□□□□□ -1.81
Six1Q62231 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.72□□□□□ -1.81
Six1Q62231 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.72□□□□□ -1.81
Six1Q62231 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Six1Q62231 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.72□□□□□ -1.81
Six1Q62231 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.72□□□□□ -1.81
Six1Q62231 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Six1Q62231 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Six1Q62231 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Six1Q62231 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Six1Q62231 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Gm23532-201ENSMUST00000104569 112 ntBASIC3.71□□□□□ -1.82
Six1Q62231 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.71□□□□□ -1.82
Six1Q62231 Gm15613-201ENSMUST00000118396 326 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm13502-201ENSMUST00000121574 684 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm14810-201ENSMUST00000121628 486 ntBASIC3.71□□□□□ -1.82
Six1Q62231 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.71□□□□□ -1.82
Six1Q62231 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.71□□□□□ -1.82
Six1Q62231 Gm24745-201ENSMUST00000157840 85 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm16290-201ENSMUST00000161175 474 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm16147-201ENSMUST00000162143 373 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm2966-201ENSMUST00000166052 481 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm17204-201ENSMUST00000167936 478 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm27903-201ENSMUST00000175482 126 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm28010-201ENSMUST00000179485 126 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm9722-201ENSMUST00000194568 802 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm35570-201ENSMUST00000198730 681 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm43559-201ENSMUST00000198755 466 ntBASIC3.71□□□□□ -1.82
Six1Q62231 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.71□□□□□ -1.82
Six1Q62231 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Six1Q62231 Gm44857-201ENSMUST00000208331 196 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Gm45710-201ENSMUST00000212847 215 ntBASIC3.71□□□□□ -1.82
Six1Q62231 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.71□□□□□ -1.82
Six1Q62231 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Six1Q62231 Gm23846-201ENSMUST00000083835 107 ntBASIC3.71□□□□□ -1.82
Six1Q62231 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Six1Q62231 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Six1Q62231 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Six1Q62231 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six1Q62231 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six1Q62231 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six1Q62231 Gm11372-201ENSMUST00000117348 570 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm11890-201ENSMUST00000119585 417 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm22986-201ENSMUST00000122753 130 ntBASIC3.7□□□□□ -1.82
Six1Q62231 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.7□□□□□ -1.82
Six1Q62231 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Six1Q62231 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.7□□□□□ -1.82
Six1Q62231 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.7□□□□□ -1.82
Six1Q62231 Gm25557-201ENSMUST00000158084 315 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm25438-201ENSMUST00000158281 110 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.7□□□□□ -1.82
Six1Q62231 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.7□□□□□ -1.82
Six1Q62231 Gm23365-201ENSMUST00000175019 125 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm25960-201ENSMUST00000175110 125 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm44453-201ENSMUST00000175161 126 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Six1Q62231 Gm25195-201ENSMUST00000177656 126 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm8498-201ENSMUST00000188227 974 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm38231-201ENSMUST00000192030 347 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm37599-201ENSMUST00000193067 489 ntBASIC3.7□□□□□ -1.82
Six1Q62231 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six1Q62231 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.7□□□□□ -1.82
Six1Q62231 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.7□□□□□ -1.82
Six1Q62231 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.7□□□□□ -1.82
Six1Q62231 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.7□□□□□ -1.82
Six1Q62231 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six1Q62231 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Six1Q62231 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Six1Q62231 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.7□□□□□ -1.82
Six1Q62231 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms