Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Mir6917-201ENSMUST00000184111 61 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm28118-201ENSMUST00000185957 294 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm29525-201ENSMUST00000189844 699 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm29523-201ENSMUST00000191415 699 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm45247-201ENSMUST00000210757 309 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm4987-201ENSMUST00000078326 408 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm25308-201ENSMUST00000104171 158 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm11890-201ENSMUST00000119585 417 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm14240-201ENSMUST00000120353 546 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm7308-201ENSMUST00000121087 447 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm13460-201ENSMUST00000121274 353 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm22890-201ENSMUST00000158642 144 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm6075-201ENSMUST00000186816 486 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav8d-2Q5R1B6 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Trav8d-2Q5R1B6 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Trav8d-2Q5R1B6 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.53□□□□□ -1.85
Trav8d-2Q5R1B6 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
Trav8d-2Q5R1B6 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
Trav8d-2Q5R1B6 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm15148-201ENSMUST00000117602 156 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm12025-201ENSMUST00000117768 144 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm12156-201ENSMUST00000119188 554 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm5762-201ENSMUST00000119204 258 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm12757-201ENSMUST00000119465 800 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm13443-201ENSMUST00000120770 555 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm12105-201ENSMUST00000120846 779 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm27025-201ENSMUST00000182392 942 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm27374-201ENSMUST00000183660 81 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm44665-201ENSMUST00000205381 251 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm45409-201ENSMUST00000211486 252 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav8d-2Q5R1B6 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Trav8d-2Q5R1B6 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trav8d-2Q5R1B6 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trav8d-2Q5R1B6 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trav8d-2Q5R1B6 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 165.3 ms