Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.74□□□□□ -1.81
Upf3bQ3ULL6 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm24541-201ENSMUST00000103871 96 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm12722-201ENSMUST00000118507 493 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm11404-201ENSMUST00000120872 494 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm11260-201ENSMUST00000121163 942 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm3160-201ENSMUST00000128343 607 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm23592-201ENSMUST00000157859 117 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm25520-201ENSMUST00000158389 118 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm26141-201ENSMUST00000175299 126 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Mir6238-201ENSMUST00000184140 129 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm37164-201ENSMUST00000192809 637 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm37490-201ENSMUST00000195566 724 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm43476-201ENSMUST00000197873 405 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm18921-201ENSMUST00000221798 366 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm3565-201ENSMUST00000222670 609 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3bQ3ULL6 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm12788-201ENSMUST00000119090 308 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm13868-201ENSMUST00000122411 294 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm28030-201ENSMUST00000184987 138 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm7182-201ENSMUST00000193351 732 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm37676-201ENSMUST00000195496 507 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm44294-201ENSMUST00000205090 728 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm45245-201ENSMUST00000210082 376 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm18644-201ENSMUST00000211458 815 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm7639-201ENSMUST00000212608 484 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm4052-201ENSMUST00000220890 451 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm25630-201ENSMUST00000084000 162 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Upf3bQ3ULL6 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Upf3bQ3ULL6 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Upf3bQ3ULL6 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm24987-201ENSMUST00000104453 134 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm25727-201ENSMUST00000104522 131 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm14811-201ENSMUST00000117070 117 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm14771-201ENSMUST00000118249 203 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm15060-201ENSMUST00000119550 948 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm15014-201ENSMUST00000120742 258 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm14810-201ENSMUST00000121628 486 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm12998-201ENSMUST00000122445 789 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm27592-201ENSMUST00000157729 126 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm23773-201ENSMUST00000158985 296 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm16026-202ENSMUST00000159695 772 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Samd15-201ENSMUST00000169669 1194 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm22174-201ENSMUST00000175050 125 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm22692-201ENSMUST00000175055 125 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm27634-201ENSMUST00000175060 126 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm22460-201ENSMUST00000175269 124 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm25535-201ENSMUST00000175364 125 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm24365-201ENSMUST00000175384 125 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms