Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm28500-201ENSMUST00000190286 151 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm28724-202ENSMUST00000194218 295 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm6051-201ENSMUST00000201529 352 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm45081-201ENSMUST00000206281 572 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm44757-201ENSMUST00000206373 157 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm45458-201ENSMUST00000209900 522 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 AC115047.1-201ENSMUST00000213795 322 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm24707-201ENSMUST00000082812 107 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Brf2Q3UAW9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
Brf2Q3UAW9 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm13000-201ENSMUST00000120937 496 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm10444-201ENSMUST00000126708 148 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm24198-201ENSMUST00000157812 108 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm22529-201ENSMUST00000158817 123 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm22530-201ENSMUST00000158820 118 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm16589-201ENSMUST00000159522 918 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm3053-201ENSMUST00000161709 616 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm24520-201ENSMUST00000179510 110 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm21894-201ENSMUST00000179631 546 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm28847-201ENSMUST00000186778 700 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm29365-201ENSMUST00000189461 699 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm29288-201ENSMUST00000191582 901 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm18791-201ENSMUST00000204611 726 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm7786-201ENSMUST00000210494 436 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Mir16-2-201ENSMUST00000083672 95 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Brf2Q3UAW9 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.02□□□□□ -1.77
Brf2Q3UAW9 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.01□□□□□ -1.77
Brf2Q3UAW9 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Gm24951-201ENSMUST00000102182 109 ntBASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Gm10552-201ENSMUST00000113396 372 ntBASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Gm14107-201ENSMUST00000117774 330 ntBASIC4.01□□□□□ -1.77
Brf2Q3UAW9 Gm9440-201ENSMUST00000119667 539 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms