Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf180Q3U827 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf180Q3U827 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.46□□□□□ -1.54
Rnf180Q3U827 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf180Q3U827 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf180Q3U827 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf180Q3U827 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Rnf180Q3U827 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf180Q3U827 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Rnf180Q3U827 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.46□□□□□ -1.54
Rnf180Q3U827 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm13614-201ENSMUST00000117306 503 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm11843-201ENSMUST00000118984 425 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm14916-201ENSMUST00000121904 204 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm23981-201ENSMUST00000157136 106 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm17152-201ENSMUST00000172430 535 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm2092-201ENSMUST00000178887 639 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm2759-201ENSMUST00000179938 639 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Mir7081-201ENSMUST00000184490 75 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm9722-201ENSMUST00000194568 802 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm42453-201ENSMUST00000200477 409 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.45□□□□□ -1.54
Rnf180Q3U827 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf180Q3U827 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rnf180Q3U827 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm15426-201ENSMUST00000117823 556 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm13379-201ENSMUST00000118053 621 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm13170-201ENSMUST00000119716 643 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm15387-201ENSMUST00000120421 648 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm24910-201ENSMUST00000157289 272 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm25553-201ENSMUST00000158076 79 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm9593-201ENSMUST00000166034 469 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm26993-201ENSMUST00000182766 789 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm27539-201ENSMUST00000184971 224 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm37418-201ENSMUST00000195031 274 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm43142-201ENSMUST00000198670 361 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm17991-201ENSMUST00000208139 297 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm3565-201ENSMUST00000222670 609 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.44□□□□□ -1.54
Rnf180Q3U827 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rnf180Q3U827 Gm22739-201ENSMUST00000083437 160 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms