Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm12245-201ENSMUST00000117266 357 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm6568-201ENSMUST00000122274 697 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm13194-201ENSMUST00000142299 311 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm22254-201ENSMUST00000179186 110 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm29492-201ENSMUST00000187124 457 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm37682-201ENSMUST00000191776 522 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm37617-201ENSMUST00000194309 159 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm37095-201ENSMUST00000195421 205 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm44308-201ENSMUST00000197080 99 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC6.44□□□□□ -1.38
Col17a1Q07563 AC125379.1-201ENSMUST00000221928 111 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm30155-201ENSMUST00000223458 339 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 AC115291.1-201ENSMUST00000226803 258 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm26107-201ENSMUST00000083972 107 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col17a1Q07563 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col17a1Q07563 AC122317.3-201ENSMUST00000219320 3524 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6.44□□□□□ -1.38
Col17a1Q07563 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col17a1Q07563 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col17a1Q07563 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col17a1Q07563 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm12358-201ENSMUST00000121842 520 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm24635-201ENSMUST00000122712 128 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm28094-201ENSMUST00000185262 390 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm7654-201ENSMUST00000186738 683 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC6.43□□□□□ -1.38
Col17a1Q07563 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm28389-201ENSMUST00000190090 697 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm44472-201ENSMUST00000204922 943 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm34783-201ENSMUST00000209159 303 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.43□□□□□ -1.38
Col17a1Q07563 AC157017.1-201ENSMUST00000220148 364 ntBASIC6.43□□□□□ -1.38
Col17a1Q07563 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Col17a1Q07563 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Col17a1Q07563 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col17a1Q07563 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col17a1Q07563 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col17a1Q07563 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm7834-201ENSMUST00000117560 437 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm11718-201ENSMUST00000119942 537 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm22080-201ENSMUST00000157591 106 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm24960-201ENSMUST00000157923 90 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm16134-201ENSMUST00000161714 336 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm26652-202ENSMUST00000181672 475 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm27905-201ENSMUST00000184005 207 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm28282-201ENSMUST00000186072 186 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm44355-201ENSMUST00000200417 104 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm18011-201ENSMUST00000203717 565 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm44475-201ENSMUST00000204041 424 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm20948-201ENSMUST00000211091 449 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm18997-201ENSMUST00000216353 822 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 AC133517.1-203ENSMUST00000225570 390 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 AC117202.2-201ENSMUST00000226491 1101 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col17a1Q07563 Snora70-201ENSMUST00000083047 137 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Col17a1Q07563 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm38374-201ENSMUST00000194417 2033 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col17a1Q07563 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col17a1Q07563 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col17a1Q07563 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms