Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm23608-201ENSMUST00000104545 128 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm14933-201ENSMUST00000118840 481 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm22563-201ENSMUST00000157333 269 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm16125-201ENSMUST00000159003 339 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm3030-201ENSMUST00000163410 516 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm29134-201ENSMUST00000186579 126 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm6501-201ENSMUST00000187178 916 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm28241-201ENSMUST00000190916 235 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm44125-201ENSMUST00000203068 448 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm45588-201ENSMUST00000211213 630 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col6a1Q04857 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm23679-201ENSMUST00000083161 119 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm23096-201ENSMUST00000083447 107 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm23733-201ENSMUST00000083750 106 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a1Q04857 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a1Q04857 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a1Q04857 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Snord66-201ENSMUST00000104051 75 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm11862-201ENSMUST00000119678 659 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm11200-201ENSMUST00000121698 448 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.68□□□□□ -1.5
Col6a1Q04857 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm8161-201ENSMUST00000168739 481 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm17152-201ENSMUST00000172430 535 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm27676-201ENSMUST00000183669 61 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm27148-201ENSMUST00000185086 160 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a1Q04857 Npn2-202ENSMUST00000189275 235 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm37743-201ENSMUST00000194645 376 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm29754-201ENSMUST00000206269 358 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm8423-201ENSMUST00000211387 607 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm7380-201ENSMUST00000211599 466 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm45710-201ENSMUST00000212847 215 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.68□□□□□ -1.5
Col6a1Q04857 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a1Q04857 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.68□□□□□ -1.5
Col6a1Q04857 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a1Q04857 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a1Q04857 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm13475-201ENSMUST00000119290 234 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms