Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm13650-201ENSMUST00000117729 433 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm14119-201ENSMUST00000119511 235 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm14776-201ENSMUST00000121029 887 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm25295-201ENSMUST00000122794 306 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm25606-201ENSMUST00000158363 95 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm27445-201ENSMUST00000184484 72 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm27249-201ENSMUST00000185049 328 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm29747-201ENSMUST00000194764 585 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm42758-201ENSMUST00000202146 283 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm18540-201ENSMUST00000204025 526 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm9712-201ENSMUST00000210842 311 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Nkx3-1P97436 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Nkx3-1P97436 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm25581-201ENSMUST00000083410 164 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm25099-201ENSMUST00000093716 116 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nkx3-1P97436 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Nkx3-1P97436 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.05□□□□□ -1.92
Nkx3-1P97436 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm6274-201ENSMUST00000118173 797 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm12902-201ENSMUST00000118389 322 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm24739-201ENSMUST00000158855 292 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm23773-201ENSMUST00000158985 296 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm23775-201ENSMUST00000158991 249 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm19030-201ENSMUST00000194947 552 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm42832-201ENSMUST00000196361 745 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm42621-201ENSMUST00000198114 275 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm10237-201ENSMUST00000078393 273 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Nkx3-1P97436 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.04□□□□□ -1.92
Nkx3-1P97436 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nkx3-1P97436 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm11830-201ENSMUST00000120175 561 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm4725-201ENSMUST00000151048 587 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm25966-201ENSMUST00000157169 117 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm24534-201ENSMUST00000157949 291 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm23179-201ENSMUST00000158693 304 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm3470-201ENSMUST00000160819 420 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm4540-201ENSMUST00000170669 429 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm29064-201ENSMUST00000187014 813 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm28069-201ENSMUST00000189926 214 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm43308-201ENSMUST00000197236 373 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm43217-201ENSMUST00000199513 367 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm35857-201ENSMUST00000212739 178 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm5917-201ENSMUST00000217638 721 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm4987-201ENSMUST00000078326 408 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.03□□□□□ -1.92
Nkx3-1P97436 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Nkx3-1P97436 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms