Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm25726-201ENSMUST00000104529 129 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm14355-201ENSMUST00000117352 264 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm11196-201ENSMUST00000119052 395 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm13214-201ENSMUST00000122137 408 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm14804-201ENSMUST00000122322 508 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm14333-201ENSMUST00000130484 264 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm23069-201ENSMUST00000158240 311 ntBASIC5.47□□□□□ -1.53
Sox1P53783 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox1P53783 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sox1P53783 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm19641-201ENSMUST00000188432 417 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm32308-201ENSMUST00000203053 280 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm45422-201ENSMUST00000211476 246 ntBASIC5.47□□□□□ -1.53
Sox1P53783 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm8249-201ENSMUST00000219225 465 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm7093-201ENSMUST00000223004 581 ntBASIC5.47□□□□□ -1.53
Sox1P53783 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.47□□□□□ -1.53
Sox1P53783 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sox1P53783 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm23508-201ENSMUST00000083079 72 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Gm22293-201ENSMUST00000083314 109 ntBASIC5.47□□□□□ -1.53
Sox1P53783 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sox1P53783 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox1P53783 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.47□□□□□ -1.53
Sox1P53783 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox1P53783 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Sox1P53783 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox1P53783 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.46□□□□□ -1.53
Sox1P53783 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox1P53783 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox1P53783 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sox1P53783 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Sox1P53783 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox1P53783 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox1P53783 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox1P53783 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox1P53783 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox1P53783 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm14753-201ENSMUST00000118503 246 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm12646-201ENSMUST00000119144 238 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm14647-201ENSMUST00000119392 680 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm11794-201ENSMUST00000119446 237 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm13406-201ENSMUST00000121991 256 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm25058-201ENSMUST00000157365 128 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Zakit-201ENSMUST00000157677 308 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm8207-201ENSMUST00000171204 502 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm4842-201ENSMUST00000183237 835 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Gm27568-201ENSMUST00000184220 99 ntBASIC5.46□□□□□ -1.54
Sox1P53783 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox1P53783 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox1P53783 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Sox1P53783 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.46□□□□□ -1.54
Sox1P53783 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.46□□□□□ -1.54
Sox1P53783 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox1P53783 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox1P53783 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox1P53783 Snord68-201ENSMUST00000082516 86 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm6043-201ENSMUST00000099961 492 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.46□□□□□ -1.54
Sox1P53783 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox1P53783 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox1P53783 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms