Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.98□□□□□ -1.61
Ercc3P49135 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm39197-201ENSMUST00000212069 457 ntBASIC4.98□□□□□ -1.61
Ercc3P49135 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm35262-201ENSMUST00000215133 267 ntBASIC4.98□□□□□ -1.61
Ercc3P49135 Gm19987-201ENSMUST00000216339 499 ntBASIC4.98□□□□□ -1.61
Ercc3P49135 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.98□□□□□ -1.61
Ercc3P49135 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ercc3P49135 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.98□□□□□ -1.61
Ercc3P49135 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ercc3P49135 Gm42534-201ENSMUST00000196063 1754 ntBASIC4.98□□□□□ -1.61
Ercc3P49135 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ercc3P49135 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ercc3P49135 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ercc3P49135 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.97□□□□□ -1.61
Ercc3P49135 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ercc3P49135 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ercc3P49135 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ercc3P49135 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ercc3P49135 Gm23481-201ENSMUST00000104173 131 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ercc3P49135 Gm13550-201ENSMUST00000118185 525 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm14301-201ENSMUST00000120181 324 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm12383-201ENSMUST00000120628 760 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm12340-201ENSMUST00000121617 462 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm9785-202ENSMUST00000144563 593 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm22637-201ENSMUST00000158144 283 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.97□□□□□ -1.61
Ercc3P49135 Gm20773-201ENSMUST00000178940 681 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Mir6907-201ENSMUST00000183764 71 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ercc3P49135 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.97□□□□□ -1.61
Ercc3P49135 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.97□□□□□ -1.61
Ercc3P49135 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.97□□□□□ -1.61
Ercc3P49135 Gm17893-201ENSMUST00000203017 770 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ercc3P49135 Gm4045-201ENSMUST00000204076 310 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm44634-201ENSMUST00000206119 152 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 AC168880.1-201ENSMUST00000225113 707 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ercc3P49135 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ercc3P49135 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ercc3P49135 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.97□□□□□ -1.61
Ercc3P49135 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ercc3P49135 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Ercc3P49135 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Ercc3P49135 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.96□□□□□ -1.61
Ercc3P49135 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
Ercc3P49135 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ercc3P49135 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ercc3P49135 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Ercc3P49135 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm24788-201ENSMUST00000104283 156 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm14125-201ENSMUST00000113442 680 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm15110-201ENSMUST00000117545 881 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm11506-201ENSMUST00000122414 470 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm25102-201ENSMUST00000122479 112 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.96□□□□□ -1.62
Ercc3P49135 Gm22968-201ENSMUST00000157955 118 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ercc3P49135 Gm28471-201ENSMUST00000185994 615 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm28598-201ENSMUST00000186490 615 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC4.96□□□□□ -1.62
Ercc3P49135 Gm29268-201ENSMUST00000188669 615 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm29218-205ENSMUST00000190846 615 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm28978-201ENSMUST00000191120 615 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm37172-201ENSMUST00000191926 615 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Gm37438-201ENSMUST00000192813 393 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.96□□□□□ -1.62
Ercc3P49135 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ercc3P49135 Gm8132-201ENSMUST00000204938 640 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 140.7 ms