Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm23152-201ENSMUST00000175322 116 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Traf1P39428 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Gm27580-201ENSMUST00000183666 149 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC4.59□□□□□ -1.67
Traf1P39428 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Traf1P39428 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Traf1P39428 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.59□□□□□ -1.67
Traf1P39428 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Gm19418-201ENSMUST00000197436 580 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Gm42516-201ENSMUST00000198691 767 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Gm18429-201ENSMUST00000198707 421 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Traf1P39428 Gm6929-201ENSMUST00000210930 468 ntBASIC4.59□□□□□ -1.67
Traf1P39428 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Traf1P39428 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Traf1P39428 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Traf1P39428 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Traf1P39428 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.59□□□□□ -1.67
Traf1P39428 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.59□□□□□ -1.67
Traf1P39428 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Traf1P39428 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Traf1P39428 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Gm25004-201ENSMUST00000083811 161 ntBASIC4.59□□□□□ -1.67
Traf1P39428 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.59□□□□□ -1.68
Traf1P39428 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.59□□□□□ -1.68
Traf1P39428 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm25313-201ENSMUST00000101817 116 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm23133-201ENSMUST00000104255 135 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Gm13865-201ENSMUST00000120957 865 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm13419-201ENSMUST00000121711 271 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm14162-201ENSMUST00000121985 601 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm22339-201ENSMUST00000157718 62 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm6486-201ENSMUST00000166202 434 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.58□□□□□ -1.68
Traf1P39428 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm23287-201ENSMUST00000179427 116 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm25942-201ENSMUST00000180080 110 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm23143-201ENSMUST00000180137 116 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28574-201ENSMUST00000185757 699 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28781-201ENSMUST00000185760 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28339-201ENSMUST00000185845 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm29062-201ENSMUST00000186032 694 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29574-201ENSMUST00000186226 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28828-201ENSMUST00000186601 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28057-201ENSMUST00000186603 615 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28255-201ENSMUST00000187101 694 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29563-201ENSMUST00000187249 496 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29307-201ENSMUST00000187367 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29408-201ENSMUST00000187536 216 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28397-201ENSMUST00000187970 699 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28896-201ENSMUST00000188609 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29545-201ENSMUST00000188878 694 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29598-201ENSMUST00000188996 588 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29339-201ENSMUST00000189613 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm28159-201ENSMUST00000190296 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29366-201ENSMUST00000190481 699 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm29407-201ENSMUST00000191468 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm37433-201ENSMUST00000192695 678 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm37441-201ENSMUST00000194430 678 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm38107-201ENSMUST00000194873 696 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Gm43214-201ENSMUST00000199242 352 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.58□□□□□ -1.68
Traf1P39428 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Gm25592-201ENSMUST00000082635 131 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm24871-201ENSMUST00000083099 116 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.58□□□□□ -1.68
Traf1P39428 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Rnu5g-201ENSMUST00000093721 116 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Traf1P39428 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.58□□□□□ -1.68
Traf1P39428 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms