Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.4□□□□□ -1.7
RxraP28700 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.4□□□□□ -1.71
RxraP28700 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.4□□□□□ -1.71
RxraP28700 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RxraP28700 Gm22473-201ENSMUST00000104114 132 ntBASIC4.4□□□□□ -1.71
RxraP28700 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.4□□□□□ -1.71
RxraP28700 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 Gm22968-201ENSMUST00000157955 118 ntBASIC4.4□□□□□ -1.71
RxraP28700 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RxraP28700 Gm18117-201ENSMUST00000187720 742 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm23925-202ENSMUST00000188429 132 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.4□□□□□ -1.71
RxraP28700 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm20162-201ENSMUST00000193629 871 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm28724-202ENSMUST00000194218 295 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm37576-201ENSMUST00000194228 372 ntBASIC4.4□□□□□ -1.71
RxraP28700 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.4□□□□□ -1.71
RxraP28700 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm42828-201ENSMUST00000199669 469 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm43580-201ENSMUST00000202892 284 ntBASIC4.4□□□□□ -1.71
RxraP28700 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm20039-201ENSMUST00000210329 394 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm46190-201ENSMUST00000219650 427 ntBASIC4.4□□□□□ -1.71
RxraP28700 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.4□□□□□ -1.71
RxraP28700 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.4□□□□□ -1.71
RxraP28700 AC117814.1-201ENSMUST00000226135 352 ntBASIC4.4□□□□□ -1.71
RxraP28700 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RxraP28700 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.4□□□□□ -1.71
RxraP28700 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.4□□□□□ -1.71
RxraP28700 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RxraP28700 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RxraP28700 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RxraP28700 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.4□□□□□ -1.71
RxraP28700 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RxraP28700 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Gm26002-201ENSMUST00000101915 107 ntBASIC4.39□□□□□ -1.71
RxraP28700 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Gm15752-201ENSMUST00000117427 394 ntBASIC4.39□□□□□ -1.71
RxraP28700 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm12340-201ENSMUST00000121617 462 ntBASIC4.39□□□□□ -1.71
RxraP28700 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.39□□□□□ -1.71
RxraP28700 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.39□□□□□ -1.71
RxraP28700 Gm23781-201ENSMUST00000157940 308 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm3102-201ENSMUST00000164236 489 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm17064-201ENSMUST00000167690 452 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm4540-201ENSMUST00000170669 429 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC4.39□□□□□ -1.71
RxraP28700 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.39□□□□□ -1.71
RxraP28700 Gm43096-201ENSMUST00000196173 421 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm42758-201ENSMUST00000202146 283 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm43028-201ENSMUST00000202561 481 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm43975-201ENSMUST00000203023 481 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm18691-201ENSMUST00000203593 872 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm3189-201ENSMUST00000205595 832 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RxraP28700 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.39□□□□□ -1.71
RxraP28700 Gm18944-201ENSMUST00000207672 643 ntBASIC4.39□□□□□ -1.71
RxraP28700 AC156795.1-201ENSMUST00000214655 414 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.39□□□□□ -1.71
RxraP28700 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.39□□□□□ -1.71
RxraP28700 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RxraP28700 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.39□□□□□ -1.71
RxraP28700 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RxraP28700 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.39□□□□□ -1.71
RxraP28700 Gm7171-201ENSMUST00000177413 1349 ntBASIC4.39□□□□□ -1.71
RxraP28700 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RxraP28700 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RxraP28700 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RxraP28700 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RxraP28700 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RxraP28700 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RxraP28700 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.38□□□□□ -1.71
RxraP28700 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.38□□□□□ -1.71
RxraP28700 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.38□□□□□ -1.71
RxraP28700 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RxraP28700 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RxraP28700 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RxraP28700 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 220.5 ms