Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Sdc1P18828 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Sdc1P18828 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm11566-201ENSMUST00000118550 203 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm14687-201ENSMUST00000120206 363 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm6591-201ENSMUST00000121063 434 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm13220-201ENSMUST00000121535 508 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm15147-201ENSMUST00000122263 483 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm26476-201ENSMUST00000122618 313 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm23327-201ENSMUST00000157420 78 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm22536-201ENSMUST00000158171 134 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Mir5106-201ENSMUST00000174936 73 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm7909-201ENSMUST00000182688 614 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Mir7653-201ENSMUST00000184358 61 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm18325-201ENSMUST00000203228 835 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm6590-201ENSMUST00000203343 687 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm19253-201ENSMUST00000204279 307 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm19244-201ENSMUST00000204340 253 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm30674-201ENSMUST00000214523 392 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Sdc1P18828 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Sdc1P18828 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Sdc1P18828 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.07□□□□□ -1.92
Sdc1P18828 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.06□□□□□ -1.92
Sdc1P18828 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Gm26367-201ENSMUST00000104165 132 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm11931-201ENSMUST00000121630 447 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm12885-201ENSMUST00000122246 328 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.06□□□□□ -1.92
Sdc1P18828 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Sdc1P18828 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Mir7235-201ENSMUST00000183796 56 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.06□□□□□ -1.92
Sdc1P18828 Gm43724-201ENSMUST00000197516 226 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm20177-201ENSMUST00000203705 334 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm44404-201ENSMUST00000203979 636 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm43897-201ENSMUST00000204019 309 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm43919-201ENSMUST00000204303 364 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm18127-201ENSMUST00000208479 725 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm18644-201ENSMUST00000211458 815 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm18645-202ENSMUST00000212222 760 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Sdc1P18828 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 AC153800.1-201ENSMUST00000219212 365 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.06□□□□□ -1.92
Sdc1P18828 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Gm19134-201ENSMUST00000221203 487 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Sdc1P18828 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Sdc1P18828 Olfr713-201ENSMUST00000098139 975 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Sdc1P18828 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Sdc1P18828 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.06□□□□□ -1.92
Sdc1P18828 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Sdc1P18828 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Sdc1P18828 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Sdc1P18828 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm26067-201ENSMUST00000103789 110 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm12112-201ENSMUST00000117772 231 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 125.7 ms