Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Gm22266-201ENSMUST00000104011 138 ntBASIC5.68□□□□□ -1.5
RaraP11416 Gm22592-201ENSMUST00000104242 131 ntBASIC5.68□□□□□ -1.5
RaraP11416 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RaraP11416 Gm13406-201ENSMUST00000121991 256 ntBASIC5.68□□□□□ -1.5
RaraP11416 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.68□□□□□ -1.5
RaraP11416 Gm27803-201ENSMUST00000183763 119 ntBASIC5.68□□□□□ -1.5
RaraP11416 Gm19641-201ENSMUST00000188432 417 ntBASIC5.68□□□□□ -1.5
RaraP11416 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.68□□□□□ -1.5
RaraP11416 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Gm17956-201ENSMUST00000199931 838 ntBASIC5.68□□□□□ -1.5
RaraP11416 Gm43440-201ENSMUST00000201957 729 ntBASIC5.68□□□□□ -1.5
RaraP11416 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.68□□□□□ -1.5
RaraP11416 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RaraP11416 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.68□□□□□ -1.5
RaraP11416 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RaraP11416 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RaraP11416 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RaraP11416 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RaraP11416 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.67□□□□□ -1.5
RaraP11416 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RaraP11416 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RaraP11416 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm15772-201ENSMUST00000118533 438 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm14915-201ENSMUST00000120747 204 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm11556-201ENSMUST00000120751 288 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm14049-201ENSMUST00000121009 636 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm25489-201ENSMUST00000158727 141 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm3531-201ENSMUST00000162698 489 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.67□□□□□ -1.5
RaraP11416 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Gm2914-201ENSMUST00000186120 328 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.67□□□□□ -1.5
RaraP11416 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Gm38098-201ENSMUST00000194115 241 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm43975-201ENSMUST00000203023 481 ntBASIC5.67□□□□□ -1.5
RaraP11416 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
RaraP11416 Gm43914-201ENSMUST00000203592 594 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm18791-201ENSMUST00000204611 726 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm44820-201ENSMUST00000207420 396 ntBASIC5.67□□□□□ -1.5
RaraP11416 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm17999-201ENSMUST00000211568 542 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.67□□□□□ -1.5
RaraP11416 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.67□□□□□ -1.5
RaraP11416 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.67□□□□□ -1.5
RaraP11416 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.67□□□□□ -1.5
RaraP11416 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RaraP11416 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.67□□□□□ -1.5
RaraP11416 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.67□□□□□ -1.5
RaraP11416 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RaraP11416 Gm26228-201ENSMUST00000082512 107 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm25080-201ENSMUST00000082526 107 ntBASIC5.67□□□□□ -1.5
RaraP11416 Snora44-201ENSMUST00000082670 129 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm25792-201ENSMUST00000083289 100 ntBASIC5.67□□□□□ -1.5
RaraP11416 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm25518-201ENSMUST00000083864 107 ntBASIC5.67□□□□□ -1.5
RaraP11416 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RaraP11416 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
RaraP11416 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RaraP11416 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RaraP11416 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.67□□□□□ -1.5
RaraP11416 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.67□□□□□ -1.5
RaraP11416 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RaraP11416 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RaraP11416 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RaraP11416 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RaraP11416 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RaraP11416 Gm23653-201ENSMUST00000116751 97 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm11813-201ENSMUST00000118586 291 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm14560-201ENSMUST00000118672 375 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm15106-201ENSMUST00000119691 821 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm25176-201ENSMUST00000122640 125 ntBASIC5.66□□□□□ -1.5
RaraP11416 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 Gm17148-201ENSMUST00000164702 249 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RaraP11416 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RaraP11416 Gm18828-202ENSMUST00000181035 310 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm27024-201ENSMUST00000182561 755 ntBASIC5.66□□□□□ -1.5
RaraP11416 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 Gm21856-201ENSMUST00000187547 696 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.66□□□□□ -1.5
RaraP11416 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms