Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm22293-201ENSMUST00000083314 109 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm23850-201ENSMUST00000083830 169 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm6177-201ENSMUST00000085589 465 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm10212-201ENSMUST00000087884 324 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm18300-201ENSMUST00000192792 1406 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Lire1P11260 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Lire1P11260 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Lire1P11260 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Lire1P11260 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.09□□□□□ -1.76
Lire1P11260 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.09□□□□□ -1.76
Lire1P11260 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Lire1P11260 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lire1P11260 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lire1P11260 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm25883-201ENSMUST00000157781 271 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm22516-201ENSMUST00000158266 124 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm15796-201ENSMUST00000162135 204 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Lire1P11260 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC4.08□□□□□ -1.76
Lire1P11260 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Gm27254-201ENSMUST00000183926 517 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm28011-201ENSMUST00000184097 175 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Npn2-202ENSMUST00000189275 235 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm18644-201ENSMUST00000211458 815 ntBASIC4.08□□□□□ -1.76
Lire1P11260 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Lire1P11260 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Lire1P11260 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.08□□□□□ -1.76
Lire1P11260 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.08□□□□□ -1.76
Lire1P11260 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.08□□□□□ -1.76
Lire1P11260 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.08□□□□□ -1.76
Lire1P11260 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lire1P11260 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
Lire1P11260 Gm26439-201ENSMUST00000082592 106 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lire1P11260 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lire1P11260 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.08□□□□□ -1.76
Lire1P11260 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm23481-201ENSMUST00000104173 131 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm22498-201ENSMUST00000104497 86 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm12782-201ENSMUST00000117519 727 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm23465-201ENSMUST00000157134 262 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm26347-201ENSMUST00000157526 131 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm22536-201ENSMUST00000158171 134 ntBASIC4.07□□□□□ -1.76
Lire1P11260 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.07□□□□□ -1.76
Lire1P11260 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lire1P11260 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lire1P11260 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lire1P11260 Gm6802-202ENSMUST00000186566 126 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm43115-201ENSMUST00000196244 160 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm43489-201ENSMUST00000196810 993 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm8069-201ENSMUST00000197887 154 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm42593-201ENSMUST00000198469 377 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm2522-201ENSMUST00000204280 322 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm18258-201ENSMUST00000210413 542 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm6842-201ENSMUST00000211361 390 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Gm45857-201ENSMUST00000212207 356 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC4.07□□□□□ -1.76
Lire1P11260 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.07□□□□□ -1.76
Lire1P11260 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lire1P11260 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm23928-201ENSMUST00000082469 145 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Snord22-201ENSMUST00000083153 126 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Lire1P11260 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Lire1P11260 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lire1P11260 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Lire1P11260 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.07□□□□□ -1.76
Lire1P11260 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lire1P11260 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lire1P11260 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.07□□□□□ -1.76
Lire1P11260 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Lire1P11260 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Lire1P11260 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lire1P11260 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Lire1P11260 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Mir291a-201ENSMUST00000104815 82 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm11429-201ENSMUST00000119089 144 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm15037-201ENSMUST00000120358 259 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms