Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hoxd3P09027 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm18796-201ENSMUST00000190440 1767 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm25883-201ENSMUST00000157781 271 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm25013-201ENSMUST00000158402 128 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm23179-201ENSMUST00000158693 304 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm24168-201ENSMUST00000178825 107 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm16378-201ENSMUST00000179168 342 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm29111-201ENSMUST00000188823 696 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm28584-201ENSMUST00000191489 696 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm38138-201ENSMUST00000193274 696 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm38291-201ENSMUST00000193671 259 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm34073-201ENSMUST00000195736 212 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm44720-201ENSMUST00000206076 260 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm7407-201ENSMUST00000208301 568 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm45296-201ENSMUST00000209625 205 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm29884-201ENSMUST00000218403 453 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm18904-201ENSMUST00000218756 329 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.74□□□□□ -1.65
Hoxd3P09027 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Gm5265-201ENSMUST00000076828 342 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 AC141476.1-201ENSMUST00000224988 3387 ntBASIC4.74□□□□□ -1.65
Hoxd3P09027 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd3P09027 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd3P09027 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm42992-201ENSMUST00000197043 6836 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd3P09027 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd3P09027 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd3P09027 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd3P09027 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm7853-201ENSMUST00000100708 478 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm25345-201ENSMUST00000104505 133 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm11698-201ENSMUST00000117948 455 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm12417-201ENSMUST00000119153 403 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm11600-201ENSMUST00000119592 240 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm11693-201ENSMUST00000119625 565 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm12495-201ENSMUST00000119750 447 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm7931-201ENSMUST00000121537 271 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm24630-201ENSMUST00000122768 106 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm25278-201ENSMUST00000157267 120 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm25051-201ENSMUST00000158602 249 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm24735-201ENSMUST00000158859 118 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Nron-204ENSMUST00000158971 370 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm16125-201ENSMUST00000159003 339 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm23450-201ENSMUST00000178285 91 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm27460-201ENSMUST00000184213 100 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.73□□□□□ -1.65
Hoxd3P09027 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm43501-201ENSMUST00000202513 107 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm43105-201ENSMUST00000202987 459 ntBASIC4.73□□□□□ -1.65
Hoxd3P09027 Gm7802-201ENSMUST00000216464 262 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms