Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm13788-201ENSMUST00000120767 601 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.74□□□□□ -1.81
TnfP06804 Gm25606-201ENSMUST00000158363 95 ntBASIC3.74□□□□□ -1.81
TnfP06804 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TnfP06804 Gm27427-201ENSMUST00000185134 193 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm8600-201ENSMUST00000186320 905 ntBASIC3.74□□□□□ -1.81
TnfP06804 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.74□□□□□ -1.81
TnfP06804 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.74□□□□□ -1.81
TnfP06804 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.74□□□□□ -1.81
TnfP06804 Gm44059-201ENSMUST00000204048 351 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.74□□□□□ -1.81
TnfP06804 Gm18903-201ENSMUST00000215343 480 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm19599-201ENSMUST00000218898 358 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.74□□□□□ -1.81
TnfP06804 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.74□□□□□ -1.81
TnfP06804 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.74□□□□□ -1.81
TnfP06804 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.74□□□□□ -1.81
TnfP06804 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm6462-201ENSMUST00000081488 304 ntBASIC3.74□□□□□ -1.81
TnfP06804 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.74□□□□□ -1.81
TnfP06804 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TnfP06804 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TnfP06804 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TnfP06804 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
TnfP06804 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Gm23063-201ENSMUST00000102350 93 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm22115-201ENSMUST00000103976 133 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm23923-201ENSMUST00000104108 133 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm14825-201ENSMUST00000113538 701 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm13607-201ENSMUST00000117875 539 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm11830-201ENSMUST00000120175 561 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm14559-201ENSMUST00000121745 496 ntBASIC3.73□□□□□ -1.81
TnfP06804 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TnfP06804 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.73□□□□□ -1.81
TnfP06804 Gm37193-201ENSMUST00000193087 513 ntBASIC3.73□□□□□ -1.81
TnfP06804 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
TnfP06804 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm21006-201ENSMUST00000196930 667 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm5309-201ENSMUST00000197416 677 ntBASIC3.73□□□□□ -1.81
TnfP06804 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.73□□□□□ -1.81
TnfP06804 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.73□□□□□ -1.81
TnfP06804 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TnfP06804 Gm25739-201ENSMUST00000082886 107 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm24533-201ENSMUST00000083138 196 ntBASIC3.73□□□□□ -1.81
TnfP06804 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TnfP06804 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.73□□□□□ -1.81
TnfP06804 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TnfP06804 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
TnfP06804 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TnfP06804 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TnfP06804 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TnfP06804 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TnfP06804 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TnfP06804 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TnfP06804 Mir673-201ENSMUST00000102361 91 ntBASIC3.72□□□□□ -1.81
TnfP06804 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TnfP06804 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TnfP06804 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
TnfP06804 Gm5943-201ENSMUST00000119458 459 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm11890-201ENSMUST00000119585 417 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm14927-201ENSMUST00000120283 454 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm15508-201ENSMUST00000160330 325 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TnfP06804 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.72□□□□□ -1.81
TnfP06804 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.72□□□□□ -1.81
TnfP06804 Snord92-201ENSMUST00000175548 85 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TnfP06804 Gm3454-201ENSMUST00000185571 412 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm28596-201ENSMUST00000185870 696 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm32295-201ENSMUST00000192558 696 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm31260-201ENSMUST00000193478 696 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm43765-201ENSMUST00000196303 893 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm42621-201ENSMUST00000198114 275 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.72□□□□□ -1.81
TnfP06804 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.72□□□□□ -1.81
TnfP06804 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.72□□□□□ -1.81
TnfP06804 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.72□□□□□ -1.81
TnfP06804 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TnfP06804 Gm4987-201ENSMUST00000078326 408 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.72□□□□□ -1.81
TnfP06804 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.72□□□□□ -1.81
TnfP06804 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TnfP06804 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TnfP06804 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TnfP06804 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TnfP06804 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms