Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm15075-201ENSMUST00000122187 477 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm22453-201ENSMUST00000122801 318 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm4487-201ENSMUST00000150617 442 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm3851-201ENSMUST00000168653 318 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hcn1O88704 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm19203-201ENSMUST00000174049 939 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.93□□□□□ -1.78
Hcn1O88704 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 Mir6414-201ENSMUST00000183685 82 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm27233-201ENSMUST00000184030 307 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm27899-201ENSMUST00000184715 64 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm29428-201ENSMUST00000190086 409 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm37288-201ENSMUST00000193963 334 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm42438-201ENSMUST00000197832 974 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hcn1O88704 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.93□□□□□ -1.78
Hcn1O88704 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm35262-201ENSMUST00000215133 267 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Hcn1O88704 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hcn1O88704 Olfr203-201ENSMUST00000089305 924 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hcn1O88704 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hcn1O88704 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hcn1O88704 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.93□□□□□ -1.78
Hcn1O88704 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.92□□□□□ -1.78
Hcn1O88704 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hcn1O88704 Snora64-201ENSMUST00000104521 134 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm11488-201ENSMUST00000117277 863 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm14517-201ENSMUST00000119040 337 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm12495-201ENSMUST00000119750 447 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm14875-201ENSMUST00000120881 319 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm5379-201ENSMUST00000120973 826 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm23905-201ENSMUST00000157568 109 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm4222-201ENSMUST00000165784 470 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm28997-201ENSMUST00000188759 429 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm5731-201ENSMUST00000190969 481 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.92□□□□□ -1.78
Hcn1O88704 Gm17951-201ENSMUST00000198536 496 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm44032-201ENSMUST00000204841 166 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm44946-201ENSMUST00000208425 572 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Gm5338-201ENSMUST00000209530 639 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hcn1O88704 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Hcn1O88704 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hcn1O88704 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hcn1O88704 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hcn1O88704 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hcn1O88704 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.92□□□□□ -1.78
Hcn1O88704 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
Hcn1O88704 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Hcn1O88704 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Hcn1O88704 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hcn1O88704 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms