Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm9587-201ENSMUST00000172449 454 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Mir7017-201ENSMUST00000184894 62 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm9696-202ENSMUST00000191541 830 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm43899-201ENSMUST00000203675 246 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm7530-201ENSMUST00000218466 605 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Col6a3E9PWQ3 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Gm10343-201ENSMUST00000096279 348 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Gm43427-201ENSMUST00000198188 331 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a3E9PWQ3 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm23548-201ENSMUST00000158963 106 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm6075-201ENSMUST00000186816 486 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm19181-201ENSMUST00000218891 940 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm8880-201ENSMUST00000121800 454 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm16236-201ENSMUST00000159588 379 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm20651-201ENSMUST00000177219 329 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm19124-201ENSMUST00000191041 832 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm45452-201ENSMUST00000210905 177 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm29563-201ENSMUST00000187249 496 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm37377-201ENSMUST00000191733 304 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm38008-201ENSMUST00000195333 518 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.2□□□□□ -1.9
Col6a3E9PWQ3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm19203-201ENSMUST00000174049 939 ntBASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm12757-201ENSMUST00000119465 800 ntBASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm17183-201ENSMUST00000171170 493 ntBASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm43845-201ENSMUST00000202462 1820 ntBASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a3E9PWQ3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms