Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm25808-201ENSMUST00000122784 284 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm21893-201ENSMUST00000179119 397 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC2.51□□□□□ -2.01
Col6a5A6H584 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm45845-201ENSMUST00000207326 582 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm7588-201ENSMUST00000216866 571 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Olfr1153-201ENSMUST00000052300 957 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a5A6H584 AC153969.1-201ENSMUST00000214047 2605 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm22722-201ENSMUST00000157467 132 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm22968-201ENSMUST00000157955 118 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm22833-201ENSMUST00000158292 132 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm27898-201ENSMUST00000183987 80 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm2719-201ENSMUST00000191929 444 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 AC122188.1-201ENSMUST00000217534 312 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Col6a5A6H584 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm38374-201ENSMUST00000194417 2033 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm23950-201ENSMUST00000104026 129 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm14843-201ENSMUST00000119596 212 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm26866-201ENSMUST00000180414 802 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm20776-201ENSMUST00000189940 700 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm43227-201ENSMUST00000202239 677 ntBASIC2.5□□□□□ -2.01
Col6a5A6H584 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.5□□□□□ -2.01
Col6a5A6H584 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a5A6H584 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm44439-201ENSMUST00000203379 3592 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm25377-201ENSMUST00000104334 129 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm14987-201ENSMUST00000117820 676 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm11262-201ENSMUST00000119326 833 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm11746-201ENSMUST00000119843 821 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col6a5A6H584 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm19726-201ENSMUST00000205008 240 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm18000-201ENSMUST00000212153 800 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col6a5A6H584 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col6a5A6H584 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col6a5A6H584 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm38240-201ENSMUST00000195110 2487 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm26247-201ENSMUST00000116702 91 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm24059-201ENSMUST00000157493 312 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm43600-201ENSMUST00000202134 223 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Col6a5A6H584 Gm19269-201ENSMUST00000211401 804 ntBASIC2.49□□□□□ -2.01
Col6a5A6H584 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col6a5A6H584 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col6a5A6H584 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col6a5A6H584 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a5A6H584 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a5A6H584 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a5A6H584 Gm23551-201ENSMUST00000116852 121 ntBASIC2.48□□□□□ -2.01
Col6a5A6H584 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.48□□□□□ -2.01
Col6a5A6H584 Gm13924-201ENSMUST00000119899 486 ntBASIC2.48□□□□□ -2.01
Col6a5A6H584 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC2.48□□□□□ -2.01
Col6a5A6H584 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms