Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm18462-201ENSMUST00000208112 417 ntBASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm46327-201ENSMUST00000218240 365 ntBASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 CU024892.1-201ENSMUST00000224869 515 ntBASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm10088-201ENSMUST00000074116 423 ntBASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav4-3A0A0B4J1K1 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.15□□□□□ -2.06
Trav4-3A0A0B4J1K1 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm14811-201ENSMUST00000117070 117 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm14512-201ENSMUST00000117924 230 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm13873-201ENSMUST00000119208 427 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm22480-201ENSMUST00000122568 128 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm7582-201ENSMUST00000160831 603 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm17194-201ENSMUST00000164610 348 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Mir8103-201ENSMUST00000183945 107 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm28628-201ENSMUST00000187006 264 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm28629-201ENSMUST00000187309 263 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm30341-201ENSMUST00000194363 289 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm34224-201ENSMUST00000204606 364 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm5322-201ENSMUST00000206142 699 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm10988-201ENSMUST00000209150 1088 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm46233-201ENSMUST00000217831 449 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm25480-201ENSMUST00000083217 133 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4-3A0A0B4J1K1 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm16171-201ENSMUST00000118004 324 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm12994-201ENSMUST00000119601 447 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm13210-201ENSMUST00000121483 273 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm15065-201ENSMUST00000121699 273 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm16060-201ENSMUST00000153140 478 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm23470-201ENSMUST00000157129 120 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm24444-201ENSMUST00000157244 308 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm22310-201ENSMUST00000157509 116 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm22853-201ENSMUST00000174974 131 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm27033-201ENSMUST00000183226 544 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm27189-201ENSMUST00000184119 190 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Mir7674-201ENSMUST00000184964 63 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm27538-201ENSMUST00000185065 294 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm28976-201ENSMUST00000188070 144 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm43370-201ENSMUST00000196437 284 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm43239-201ENSMUST00000200131 201 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm42850-201ENSMUST00000202094 201 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44184-201ENSMUST00000204290 132 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm43954-201ENSMUST00000204634 544 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm5548-201ENSMUST00000055878 397 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm25699-201ENSMUST00000082896 167 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms