Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm24289-201ENSMUST00000157629 135 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Gm23617-201ENSMUST00000175410 95 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Gm20574-201ENSMUST00000182867 917 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Gm18597-201ENSMUST00000209519 694 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Gm18921-201ENSMUST00000221798 366 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 AC118006.2-201ENSMUST00000224167 962 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 AC107369.1-201ENSMUST00000227373 860 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Gm5185-201ENSMUST00000080271 619 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Snora7a-201ENSMUST00000082629 140 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Gm10356-201ENSMUST00000097152 1258 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav6-4A0A075B6B4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm6982-201ENSMUST00000118752 1560 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm42446-201ENSMUST00000199783 3284 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm23256-201ENSMUST00000102235 110 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm26140-201ENSMUST00000103807 110 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm23609-201ENSMUST00000104542 127 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm14825-201ENSMUST00000113538 701 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm15142-201ENSMUST00000121013 856 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm6762-201ENSMUST00000121769 289 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm18522-201ENSMUST00000173947 650 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm24819-201ENSMUST00000175094 166 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm22908-201ENSMUST00000177620 110 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm28069-201ENSMUST00000189926 214 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm6510-201ENSMUST00000195916 574 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm43039-201ENSMUST00000202883 963 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm6230-201ENSMUST00000208077 780 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 AC079644.1-201ENSMUST00000220586 405 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm46996-201ENSMUST00000220924 408 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm10237-201ENSMUST00000078393 273 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm24533-201ENSMUST00000083138 196 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm23136-201ENSMUST00000083425 99 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 AC124562.2-201ENSMUST00000223888 2313 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 AC124586.1-201ENSMUST00000221673 2795 ntBASIC2.53□□□□□ -2
Trav6-4A0A075B6B4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Trav6-4A0A075B6B4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Trav6-4A0A075B6B4 Gm21033-201ENSMUST00000208590 2608 ntBASIC2.53□□□□□ -2.01
Trav6-4A0A075B6B4 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm12667-201ENSMUST00000118299 1332 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm12125-201ENSMUST00000117261 736 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm12118-201ENSMUST00000119766 532 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm26254-201ENSMUST00000122491 118 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm15275-201ENSMUST00000154752 347 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm25977-201ENSMUST00000158697 85 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm15946-201ENSMUST00000160654 423 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm20673-201ENSMUST00000177167 430 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm28155-201ENSMUST00000191066 151 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm5552-201ENSMUST00000197149 515 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm43371-201ENSMUST00000202838 1031 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Gm44084-201ENSMUST00000203947 409 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC2.52□□□□□ -2.01
Trav6-4A0A075B6B4 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms