Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm44277-201ENSMUST00000205128 649 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm37288-201ENSMUST00000193963 334 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm44964-201ENSMUST00000207011 273 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Scn8aQ9WTU3 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm23957-201ENSMUST00000157209 90 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm44016-201ENSMUST00000203463 164 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm14957-201ENSMUST00000121069 817 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm23960-201ENSMUST00000157206 131 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm27374-201ENSMUST00000183660 81 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm4052-201ENSMUST00000220890 451 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.32□□□□□ -1.88
Scn8aQ9WTU3 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm24831-201ENSMUST00000116778 126 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm12568-201ENSMUST00000117362 624 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm11576-201ENSMUST00000117433 417 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm13379-201ENSMUST00000118053 621 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm6274-201ENSMUST00000118173 797 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm12222-201ENSMUST00000121368 260 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm12788-201ENSMUST00000119090 308 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm13064-201ENSMUST00000119125 557 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm28358-202ENSMUST00000189292 223 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gm44594-201ENSMUST00000208982 407 ntBASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.31□□□□□ -1.88
Scn8aQ9WTU3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Gm26423-201ENSMUST00000104277 128 ntBASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Gm13167-201ENSMUST00000118554 578 ntBASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Gm15231-201ENSMUST00000119174 447 ntBASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Gm3788-201ENSMUST00000119949 136 ntBASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Gm29610-201ENSMUST00000187749 453 ntBASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.3□□□□□ -1.88
Scn8aQ9WTU3 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms