Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm44433-201ENSMUST00000203540 4832 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm37970-201ENSMUST00000193865 1732 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm43527-201ENSMUST00000198749 3178 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm6162-201ENSMUST00000194870 2930 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm13607-201ENSMUST00000117875 539 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm14566-201ENSMUST00000118915 321 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm11352-201ENSMUST00000119264 517 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm25052-201ENSMUST00000122661 158 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm16274-201ENSMUST00000139251 592 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm25058-201ENSMUST00000157365 128 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm23538-201ENSMUST00000157535 101 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm22765-201ENSMUST00000158371 128 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm25451-201ENSMUST00000177832 121 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm26991-201ENSMUST00000180950 620 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm27477-201ENSMUST00000184649 143 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm43724-201ENSMUST00000197516 226 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm42666-201ENSMUST00000201954 152 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm44720-201ENSMUST00000206076 260 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm18414-201ENSMUST00000210858 694 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm25140-201ENSMUST00000083254 140 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Ddx56Q9D0R4 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm23746-201ENSMUST00000104229 125 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm12285-201ENSMUST00000117347 233 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm14627-201ENSMUST00000118931 567 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm4342-201ENSMUST00000118982 367 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm13239-201ENSMUST00000119920 637 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm12317-201ENSMUST00000122307 319 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm25383-201ENSMUST00000157810 144 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm3531-201ENSMUST00000162698 489 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm26828-201ENSMUST00000180640 172 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm11392-201ENSMUST00000181419 710 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm4557-201ENSMUST00000185826 907 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm4526-201ENSMUST00000186039 920 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm8708-201ENSMUST00000188500 906 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm24150-201ENSMUST00000082759 104 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm23456-201ENSMUST00000083335 137 ntBASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddx56Q9D0R4 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 123.9 ms