Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm18748-201ENSMUST00000198507 622 ntBASIC3.18□□□□□ -1.9
Cdh23Q99PF4 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm5368-201ENSMUST00000189012 589 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm24274-201ENSMUST00000116787 124 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm16445-201ENSMUST00000120399 714 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm21112-201ENSMUST00000212224 578 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm7760-201ENSMUST00000212265 578 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm15795-201ENSMUST00000160969 553 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm20660-201ENSMUST00000177515 289 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Gm45710-201ENSMUST00000212847 215 ntBASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdh23Q99PF4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm25863-201ENSMUST00000158249 329 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm18585-201ENSMUST00000215197 556 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 AC160931.3-201ENSMUST00000222111 2267 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm8880-201ENSMUST00000121800 454 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Gm28362-201ENSMUST00000189430 2420 ntBASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Cdh23Q99PF4 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Cdh23Q99PF4 Gm22073-201ENSMUST00000122668 189 ntBASIC3.15□□□□□ -1.9
Cdh23Q99PF4 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC3.15□□□□□ -1.9
Cdh23Q99PF4 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Cdh23Q99PF4 Gm28785-201ENSMUST00000187478 379 ntBASIC3.15□□□□□ -1.9
Cdh23Q99PF4 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.15□□□□□ -1.9
Cdh23Q99PF4 Gm8209-201ENSMUST00000206386 553 ntBASIC3.15□□□□□ -1.9
Cdh23Q99PF4 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.15□□□□□ -1.9
Cdh23Q99PF4 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Cdh23Q99PF4 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.15□□□□□ -1.91
Cdh23Q99PF4 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Gm24922-201ENSMUST00000158511 102 ntBASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Gm43319-201ENSMUST00000198036 2270 ntBASIC3.15□□□□□ -1.91
Cdh23Q99PF4 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.15□□□□□ -1.91
Cdh23Q99PF4 Gm13615-201ENSMUST00000120242 1612 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm37363-201ENSMUST00000192336 2233 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm27379-201ENSMUST00000183730 123 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm28141-201ENSMUST00000186676 342 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm34314-201ENSMUST00000203622 367 ntBASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdh23Q99PF4 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms