Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.76□□□□□ -1.65
Lims1Q99JW4 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.76□□□□□ -1.65
Lims1Q99JW4 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lims1Q99JW4 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm13439-201ENSMUST00000117541 409 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm9850-201ENSMUST00000117916 227 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm13082-201ENSMUST00000118877 561 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm14761-201ENSMUST00000121363 262 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm24857-201ENSMUST00000158061 310 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm25906-201ENSMUST00000158489 126 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm25365-201ENSMUST00000158852 121 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Mir3062-201ENSMUST00000174986 105 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm4617-201ENSMUST00000178993 331 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm23144-201ENSMUST00000180226 107 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm27161-201ENSMUST00000183960 562 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm27818-201ENSMUST00000184536 159 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm29229-201ENSMUST00000188874 323 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm21735-201ENSMUST00000190360 696 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm42621-201ENSMUST00000198114 275 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm42663-201ENSMUST00000199883 351 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm4321-201ENSMUST00000200520 442 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm42475-201ENSMUST00000201212 295 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm44132-201ENSMUST00000205142 151 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm8319-201ENSMUST00000205708 641 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm25134-201ENSMUST00000082646 160 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm24764-201ENSMUST00000083686 199 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.75□□□□□ -1.65
Lims1Q99JW4 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Lims1Q99JW4 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lims1Q99JW4 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm11486-201ENSMUST00000107322 478 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm14220-201ENSMUST00000118114 449 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm7312-201ENSMUST00000118798 469 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm12704-201ENSMUST00000119789 464 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm15177-201ENSMUST00000120491 577 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm2005-201ENSMUST00000120759 542 ntBASIC4.74□□□□□ -1.65
Lims1Q99JW4 Gm13533-201ENSMUST00000121104 177 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms